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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
BRCA rs73243511 chr20:30480281 T/C 9.76E-9 1005 21.17 23.37 11.2 KM Plot
BRCA rs73518121 chr19:15166762 G/T 1.35E-5 1020 21.48 23.7 11.98 KM Plot
BRCA rs74102512 chr1:88143999 G/C 3.63E-5 1013 22.03 20.43 14.52 KM Plot
BRCA rs7425417 chr2:189425279 C/T 6.03E-6 1028 21.5 24.08 13.43 KM Plot
BRCA rs74333103 chr20:30505066 G/A 2.66E-14 1012 21.43 23.6 8.5 KM Plot
BRCA rs74346439 chr18:44677467 G/C 5.05E-6 1027 21.7 21.67 18.23 KM Plot
BRCA rs74411203 chr18:44677466 G/A 5.05E-6 1027 21.7 21.67 18.23 KM Plot
BRCA rs74598567 chr1:41542775 A/G 1.74E-5 1024 21.8 20.92 10.75 KM Plot
BRCA rs74845165 chr18:44690852 T/C 5.05E-6 1027 21.7 21.67 18.23 KM Plot
BRCA rs75013685 chr2:86498880 G/A 2.23E-6 1024 21.88 19.47 12.17 KM Plot
BRCA rs75058786 chr8:52417606 T/A 1.0E-5 1016 21.23 23.37 20.68 KM Plot
BRCA rs75204681 chr9:33214544 G/A 4.18E-5 1019 21.43 23.42 20.45 KM Plot
BRCA rs75215341 chr18:44702151 C/T 3.94E-6 1025 21.63 21.58 18.23 KM Plot
BRCA rs75287977 chr18:44686823 G/A 5.05E-6 1027 21.7 21.67 18.23 KM Plot
BRCA rs75541429 chr6:43149778 G/A 1.64E-13 1019 21.73 20.82 10.73 KM Plot